Publications

Apputhurai, P, Palsson OS, Bangdiwala SI, Sperber AD, Mikocka-Walus A, and Knowles SR. “Validation of the PROMIS Global Physical and Mental Health Scale for Gastrointestinal Disorders: A Large-Scale Cross-Sectional Survey.” Neurogastroenterol Motil, vol. 38, no. 4, 2026, pp. e70059, https://doi.org/10.1111/nmo.70059

Balk, EM, Couch E, Mai HJ, Chen Y, Adam GP, Kanaan G, Caputo EL, Trikalinos TA, Williams G, Duncanson K, Talley NJ, and Lichtenstein AH. “Fiber intake and laxation in people with normal bowel function: a systematic review.” Am J Clin Nutr, vol. 123, no. 3, 2026, pp. 101212, https://doi.org/10.1016/j.ajcnut.2026.101212

Batkhurel, K, Prasad S, Potter M, Martin JH, Keely S, and Talley NJ. “Therapies Targeting Mucosal Eosinophils in Eosinophilic Gut Diseases From Esophagus to Colon.” J Gastroenterol Hepatol, vol. 41, no. 2, 2026, pp. 606-624, https://doi.org/10.1111/jgh.70221

Bernstein, CN, Gearry R, Nugent Z, Witt J, Burisch J, and Kaplan GG; Global IBD Management Cascades Committee. “Global Discrepancies in Inflammatory Bowel Disease Care Reflect Health Care Expenditure Per Capita.” Gastroenterology, vol. 170, no. 1, 2026, pp. 203-206, https://doi.org/10.1053/j.gastro.2025.08.017

Bernstein, CN, Kaplan GG, Nugent Z, Ahuja V, Ananthakrishnan AN, Banerjee R, Burisch J, Chen Y, Epstein D, Forbes AJ, Gonczi L, Gu Y, Gunawan J, Hang DV, Kaibullayeva J, Kopylov U, Kotze PG, Iade B, Lakatos PL, Limsrivilai J, Liang J, Mak JWY, Ng S, Severs M, Shen J, Sood A, Yamamoto-Furusho JK, Yuan S, Wewer MD, Wu K, Windsor JW, and Gearry RB; Globalization Cluster of the International Organization for the Study of IBD. “Inflammatory bowel disease phenotypes in diverse populations: a global comparative analysis.” J Crohns Colitis, vol. 20, no. 5, 2026, pp. jjag051, https://doi.org/10.1093/ecco-jcc/jjag051

Blickisdorf, T, Wood LG, Valkenborghs SR, Dixon AE, Horvat JC, Weaver NA, Yoong S, Berthon BS, Williams EJ, Brown AC, Jenkins CR, Morrissey ML, Wark PA, Wynne K, Grainge CL, El-Omar EM, Williams LM, Brannan JD, De Wang L, Wong SL, and Scott HA. “Personalising the management of obesity-related asthma using medical nutrition therapy and physical activity prescription: The IDEAL study protocol.” Contemp Clin Trials, vol. 160, 2026, pp. 108178, https://doi.org/10.1016/j.cct.2025.108178

Bowerman, KL, Lu Y, McRae H, Volmer JG, Zaugg J, Pope PB, Hugenholtz P, Greening C, Morrison M, Soo RM, and Evans PN. “Metagenomic analysis of fecal microbiomes reveals genetic potential for diverse hydrogen management strategies in marsupials.” mSystems, vol. 11, no. 2, 2026, pp. e0160825, https://doi.org/10.1128/msystems.01608-25

Bowerman, KL, Soo RM, Chaumeil PA, Blyton MDJ, Sørensen M, Gunbilig D, Malig M, Islam M, Zaugg J, Wood DLA, Liachko I, Auch B, Morrison M, Krause L, Lindberg Møller B, Neilson EHJ, and Hugenholtz P. “A molecular inventory of the faecal microbiomes of 23 marsupial species.” Microb Genom, vol. 12, no. 1, 2026, pp. 001601, https://doi.org/10.1099/mgen.0.001601

Bowring, J, Parigi E, Karantzas G, Chesterman S, Naude C, Cheah S, Evans S, Skvarc D, Snelling D, Baker E, and Mikocka-Walus A. “Biopsychosocial impacts of mother loss on daughters in Australia: Cross-sectional study.” Death Stud, vol. 50, no. 7, 2026, pp. 1245-1253, https://doi.org/10.1080/07481187.2025.2491571

Broeders, B, Colomier E, Carbone F, Simrén M, Bai T, Liu J, Melchior C, Gourcerol G, Chuah KH, Hui KX, Mahadeva S, Siah KTH, Gwee KA, Lipták P, Banovcin P, Holtmann G, Koloski N, Carabotti M, Annibale B, Suzuki H, Sano M, Ueda T, Shahoon H, Adibi P, Van de Bruaene C, Vanuytsel T, and Tack J. “Comparison of the Prevalence of Meal-Related Nausea in Different Functional Dyspepsia Subgroups.” Neurogastroenterol Motil, vol. 38, no. 4, 2026, pp. e70078, https://doi.org/10.1111/nmo.70078

Burns, GL, Roberts F, Wark JA, Fowler S, Jones MP, Duncanson K, Talley NJ, and Keely S. “Serological and faecal markers of irritable bowel syndrome: a systematic review and meta-analysis.” EBioMedicine, vol. 126, 2026, pp. 106198, https://doi.org/10.1016/j.ebiom.2026.106198

Buttrum, P, Young A, Eley D, Banks M, Marsh N, Cruickshank M, Elliott J, Talley NJ, Comans T, Bell SC, and O’Leary S. “Clinicians With Formal Research Qualifications Undertaking Dual Clinical and Research Activities Should be Titled and Recognised as ‘Clinician Scientists’.” Int J Health Plann Manage, vol. 41, no. 2, 2026, pp. 411-414, https://doi.org/10.1002/hpm.70046

Camilleri, M, and Talley NJ. “Are functional dyspepsia and gastroparesis really ‘interchangeable’ diseases?.” Gut, vol. 75, no. 5, 2026, pp. 851-853, https://doi.org/10.1136/gutjnl-2025-336192

Camilleri, M, and Talley NJ. “Response to: ‘Differentiating gastroparesis from functional dyspepsia is no longer sufficient’ by O’Grady ” Gut, vol. 75, no. 7, 2026, pp. 1449, https://doi.org/10.1136/gutjnl-2025-336998

Catley, CS, Hoedt EC, Pockney P, Keely S, and Hedley KE. “Unraveling anastomotic leak: biological mechanisms underlying intestinal healing after resection.” Am J Physiol Gastrointest Liver Physiol, vol. 331, no. 1, 2026, pp. G1-G11, https://doi.org/10.1152/ajpgi.00071.2026

Cheah, S, Mikocka-Walus A, Van Niekerk L, Stanley K, Druitt M, and Evans S. “The needs, preferences, and priorities for supportive healthcare in people living with endometriosis: A qualitative exploratory study.” J Health Psychol, 2026, pp. 13591053261448104, https://doi.org/10.1177/13591053261448104

Cohen, NA, Bettenworth D, Sror N, Khedraki R, Yang Q, Abreu MT, Atreya R, Al-Bawardy B, Connor SJ, D’Haens G, Dotan I, Dignass A, El Ouali S, Feagan B, Feakins R, Gearry R, Gordon IO, Hedin CRH, Hernandez-Rocha C, Kobayashi T, Leibovitzh H, Lu C, Maharshak N, Naseer M, Ollech J, Rubin DT, Sebastian S, Siegmund B, Silverberg MS, Steinwurz F, Torres J, Watermeyer G, Aswani Omprakash T, Frenkel L, Gurizzian P, Silfen A, Tzadok R, Falloon K, and Rieder F; Study of Upper Gastrointestinal Manifestations and Management of Crohn’s Disease (SUMM-CD) Group. “Definitions, diagnosis, management, and outcomes of upper gastrointestinal Crohn’s disease: an international, expert RAND/UCLA appropriateness study.” Lancet Gastroenterol Hepatol, vol. 11, no. 3, 2026, pp. 243-255, https://doi.org/10.1016/S2468-1253(25)00347-4

Cohen, NA, Sror N, Naseer M, Bettenworth D, Lu C, Khedraki R, Abreu MT, Atreya R, Al-Bawardy B, Connor SJ, d’Haens G, Dotan I, Dignass A, El Ouali S, Feagan B, Feakins R, Gearry R, Gordon IO, Hedin C, Kobayashi T, Leibovitzh H, Maharshak N, Ollech J, Sebastian S, Siegmund B, Rubin DT, Silverberg MS, Steinwurz F, Torres J, Watermeyer G, Hernandez-Rocha C, Gurizzian P, Silfen A, Tzadok R, Falloon K, and Rieder F. “Diagnosis and Management of Upper Gastrointestinal Involvement in Adult Patients With Crohn’s Disease: A Systematic Review.” Clin Gastroenterol Hepatol, vol. 24, no. 4, 2026, pp. 932-948, https://doi.org/10.1016/j.cgh.2025.03.024

Coitinho, Biurra Y, Bowring J, Dos Santos Silva L, Mikocka-Walus A, and Evans S. “”Effortful” motherhood: A mixed-methods study of the impact of endometriosis on family life.” J Health Psychol, 2026, pp. 13591053261443279, https://doi.org/10.1177/13591053261443279

Colomier, E, Jones MP, Holvoet L, Van den Houte K, Van de Bruaene C, Broeders B, Bai T, Liu J, Melchior C, Gourcerol G, Chuah KH, Hui KX, Mahadeva S, Tien Ho Siah K, Lipták P, Banovcin P, Holtmann G, Koloski N, Carabotti M, Annibale B, Suzuki H, Sano M, Ueda T, Hajihashemi P, Shahoon H, Adibi P, Simrén M, Gwee KA, Tack J, and Carbone F. “Symptom Patterns Outside the Rome IV Consensus in Eastern and Western Patients With a Disorder of Gut-Brain Interaction.” Am J Gastroenterol, 2026, https://doi.org/10.14309/ajg.0000000000003996

Da, Silva Sena CR, Martins Costa Gomes G, Künstle N, Gorlanova O, Marten A, Schulzke S, Wyler F, Murphy VE, Robinson PD, Sly PD, Usemann J, Stoecklin B, Steinberg R, Yammine S, Müller L, Latzin P, Sinues P, Gibson PG, Mattes J, Collison A, and Frey U; BILD and BLT Study Groups. “Markers in Infants of Mothers With Asthma and Associations With Respiratory Outcomes.” Allergy, vol. 81, no. 1, 2026, pp. 145-156, https://doi.org/10.1111/all.70044

Davis, R, Jones R, and Duncanson K. “Post-traumatic growth and cancer survivorship: experiences of living with treatment-related impairment.” Support Care Cancer, vol. 34, no. 2, 2026, pp. 118, https://doi.org/10.1007/s00520-026-10341-6

Davis, RH, Bryant RV, Gibson PR, and Day AS. “The fate of dietary protein in the gastrointestinal tract and implications for colonic disease.” Nat Rev Gastroenterol Hepatol, vol. 23, no. 5, 2026, pp. 381-394, https://doi.org/10.1038/s41575-026-01173-0

Day, AS, Ballard TM, Benetti M, Halmos E, Gibson PR, Yao CK, and Bryant RV. “Development and Evaluation of a Sham Diet Intended as a Placebo-Control Diet for Food-Based Interventional Trials in Ulcerative Colitis.” J Acad Nutr Diet, vol. 126, no. 7, 2026, pp. 156345, https://doi.org/10.1016/j.jand.2026.156345

Day, AS, Yao CK, Ford AC, Holtmann G, and Halmos EP. “The Challenges of Performing Controlled Trials of Diet Therapies in Gastroenterology.” JGH Open, vol. 10, no. 7, 2026, pp. e70439, https://doi.org/10.1002/jgh3.70439

de, Boer NK, Gearry RB, Bernstein CN, Banerjee R, Rubin DT, and Kaplan GG; Globalization Cluster of the International Organization of IBD. “The essential medicines list for inflammatory bowel disease: time to raise the standards of global care.” Lancet Gastroenterol Hepatol, vol. 11, no. 1, 2026, pp. 7-9, https://doi.org/10.1016/S2468-1253(25)00299-7

de, Gooyer M, Mackay MI, Mikocka-Walus A, Biurra YC, Emerson C, Klas A, Raven L, Massuger W, Giles EM, and Evans S. “”She just wants to be a normal kid”: Adolescents with inflammatory bowel disease and their caregivers’ transition from paediatric to adult care.” Br J Health Psychol, vol. 31, no. 2, 2026, pp. e70079, https://doi.org/10.1111/bjhp.70079

Dinakis, E, Xie L, Rhys-Jones D, Anderson D, Yao CK, So D, Creek DJ, Gibson PR, Muir J, and Marques FZ. “Real-Time Evaluation of Gastrointestinal pH and Transit Time in Patients With Essential Hypertension.” Hypertension, vol. 83, no. 7, 2026, pp. e26670, https://doi.org/10.1161/HYPERTENSIONAHA.126.26670

Dotan, I, Dubinsky MC, Siegel CA, Lindsay J, McGovern D, Allez M, Myrelid P, Lewis J, Sands BE, Peyrin-Biroulet L, Danese S, Ahuja V, Kaplan GG, Konings M, Gearry R, Ng SC, Jairath V, Magro F, Silverberg MS, Turner D, Abreu MT, Hart A, Dignass A, and Rubin DT; International Organization for the Study of Inflammatory Bowel Diseases (IOIBD). “IOIBD: the International Organization for the Study of Inflammatory Bowel Disease.” Ther Adv Gastroenterol, vol. 19, 2026, pp. 17562848261470923, https://doi.org/10.1177/17562848261470923

Dowrick, JM, Roy NC, Carco C, James SC, Heenan PE, Frampton CMA, Fraser K, Young W, Cooney J, Trower T, Keenan JI, McNabb WC, Mullaney JA, Bayer SB, Talley NJ, Gearry RB, and Angeli-Gordon TR. “Integrated multi-omic and symptom clustering reveals lower-gastrointestinal disorders of gut-brain interaction heterogeneity.” Gut Microbes, vol. 18, no. 1, 2026, pp. 2604871, https://doi.org/10.1080/19490976.2025.2604871

Egas, RA, Lin H, Leu AO, Tyson GW, McIlroy SJ, and Welte CU. “Carbon monoxide metabolism in freshwater anaerobic methanotrophic archaea.” Nat Commun, vol. 17, no. 1, 2026, pp. 3460, https://doi.org/10.1038/s41467-026-70080-4

Egboh, SC, Koloski NA, Jones MP, Shah A, Holtmann G, and Talley NJ. “Role of Anxiety and Depression on the Interplay Between Disorders of Gut-Brain Interaction and Eating Disorders.” Clin Transl Gastroenterol, vol. 17, no. 8, 2026, pp. e01025, https://doi.org/10.14309/ctg.0000000000001025

El-Assaad, F, and El-Omar EM. “Gut-peritoneal-multisystem axis in endometriosis.” Gut, vol. 75, no. 6, 2026, pp. 1085-1086, https://doi.org/10.1136/gutjnl-2025-337490

El-Omar, EM, and Lyu G. “eGastroenterology: a new chapter with exciting times ahead!.” eGastroenterology, vol. 4, no. 1, 2026, pp. e100427, https://doi.org/10.1136/egastro-2026-100427

Emerson, C, Klas A, Gibson PR, Olive L, Fuller-Tyszkiewicz M, and Mikocka-Walus A. “A Qualitative Template Analysis to Understand Patient and Practitioner Perspectives on a Psychological Intervention for Fatigue in Inflammatory Bowel Disease.” JGH Open, vol. 10, no. 2, 2026, pp. e70363, https://doi.org/10.1002/jgh3.70363

Engelberts, JP, and Tyson GW. “Understanding microbial ecology and evolution with single-cell genomics.” Nat Rev Genet, vol. 27, no. 1, 2026, pp. 3-4, https://doi.org/10.1038/s41576-025-00918-y

Evans, S, Skvarc D, Esterman A, Mackay MI, O’Shea M, Van Niekerk L, Druitt ML, Tsaltas J, Knowles SR, Parigi E, Stanley K, Harris J, Barber M, Dober M, Dowding C, and Mikocka-Walus A. “Telehealth cognitive behavioural therapy improves health-related quality of life and pain in endometriosis: the Healing Pelvic Pain Intervention (HaPPI)-a randomized controlled trial.” Hum Reprod Open, vol. 2026, no. 1, 2026, pp. hoag006, https://doi.org/10.1093/hropen/hoag006

Fisher, E, Brown L, and Duncanson K. “A critical realist exploration of hospital staff experiences of using nutrition dashboard technology.” BMC Health Serv Res, vol. 26, no. 1, 2026, pp. 970, https://doi.org/10.1186/s12913-026-14738-1

Forbes, AJ, Gibb SJ, Bowden N, Day AS, Frampton CMA, and Gearry RB. “Incidence, prevalence and mortality of inflammatory bowel disease in New Zealand 2006-2022 using hospital information in the Integrated Data Infrastructure (IDI).” Intern Med J, vol. 56, no. 2, 2026, pp. 229-237, https://doi.org/10.1111/imj.70291

Ford, AC, and Talley NJ. “Ten years of advances in disorders of gut-brain interaction.” Lancet Gastroenterol Hepatol, vol. 11, no. 9, 2026, pp. 743-745, https://doi.org/10.1016/S2468-1253(25)00381-4

Fowler, S, Paech GM, Hoedt EC, Pryor JC, Nieva C, Bruce JK, Nair PM, Eslick GD, Sherwin S, Pockney P, Talley NJ, Burns GL, and Keely S. “Altered peripheral CRY1 gene expression may contribute to both organic and functional gastrointestinal disease.” Exp Physiol, vol. 111, no. 3, 2026, pp. 946-962, https://doi.org/10.1113/EP092725

Gibson, PR, Fitzpatrick JA, and Halmos EP. “The Influence of Dietary Emulsifiers on the Gastrointestinal Tract: The Jury Is Still out.” Clin Gastroenterol Hepatol, vol. 24, no. 9, 2026, pp. 2628-2629, https://doi.org/10.1016/j.cgh.2025.10.031

Guo, J, Aroney STN, Domínguez-Huerta G, Smith D, Vik D, Owusu-Ansah C, Pratama AA, Solonenko S, Tian F, Howard-Varona C, Zhong ZP, Fofana A, Smith GJ, Hodgkins SB, Cronin D; IsoGenie Field Teams 2010–2017, 2019; EMERGE Coordinators; Woodcroft BJ, Tyson GW, Rich VI, Sullivan MB, Roux S, and Bagby SC. “Mobile genetic elements shape microbial diversity and functions in thawing permafrost soils.” Nat Microbiol, vol. 11, no. 7, 2026, pp. 1800-1814, https://doi.org/10.1038/s41564-026-02391-7

Halmos, EP, and Gibson PR. “Editorial: Efficacy of Pharmacological Compared With Dietary Therapy for Patients With Irritable Bowel Syndrome-It Is Nice to Have a Choice.” Aliment Pharmacol Ther, vol. 63, no. 2, 2026, pp. 310-311, https://doi.org/10.1111/apt.70452

Halmos, EP, and Gibson PR. “Letter: Lost in Translation-Replicating a Modifying FODMAP Diet in Patients With IBS.” Aliment Pharmacol Ther, vol. 64, no. 5, 2026, pp. 705-706, https://doi.org/10.1111/apt.70802

Hasler, WL, Abell T, Attaluri A, Chey WD, Cline M, Gearry RB, Gibson PR, Ho V, Lee AA, Lembo AJ, Masoud A, McCallum R, Moshiree B, Quigley EMM, Rao SSC, Sanchez M, Sarosiek I, Stocker A, Surjanhata B, Thwaites PA, Zhou J, and Kuo B. “Accelerometric Assessment of Gastric Contractility Using the Atmo Wireless Motility Capsule.” Neurogastroenterol Motil, vol. 38, no. 2, 2026, pp. e70255, https://doi.org/10.1111/nmo.70255

Henry, C, Cooper L, Adler H, Sinclair J, Martin A, Semprini A, Mikocka-Walus A, and Armour M. “Perceived impact of medicinal cannabis on pelvic pain and endometriosis related symptoms in Aotearoa New Zealand: an observational cohort study.” BMC Complement Med Ther, vol. 26, no. 1, 2026, pp. 60, https://doi.org/10.1186/s12906-025-05189-y

Hickson, SM, Torres VVL, Teh JJ, O’Keefe I, Ernst RK, Morrison M, McCarthy KL, and Wells TJ. “Genomic, proteolytic, and phenotypic characterization of Pseudomonas aeruginosa isolates causing infective endocarditis.” Microbiol Spectr, vol. 14, no. 6, 2026, pp. e0374225, https://doi.org/10.1128/spectrum.03742-25

Hoedt, EC, and Talley NJ. “Toward a personalized diet-microbiome strategy in inflammatory bowel disease: Matching donor, diet, and patient.” Med, vol. 7, no. 1, 2026, pp. 100918, https://doi.org/10.1016/j.medj.2025.100918

Hoedt, EC, Burns GL, Hedley KE, Waller S, Sanchez TC, Chisolm O, MacCallum H, Richardson S, Suthers B, Pepper E, Keely S, and Talley NJ. “Shared functional microbiome signatures in Parkinson’s disease and constipation predominate irritable bowel syndrome despite taxonomic divergence.” Brain Behav Immun Health, vol. 53, 2026, pp. 101218, https://doi.org/10.1016/j.bbih.2026.101218

Hoedt, EC, Burns GL, Hedley KE, Waller S, Sanchez TC, Chisolm O, MacCallum H, Richardson S, Suthers B, Pepper E, Keely S, and Talley NJ. “Shared functional microbiome signatures in Parkinson’s disease and constipation predominate irritable bowel syndrome despite taxonomic divergence.” Brain Behav Immun Health, vol. 53, 2026, pp. 101218, https://doi.org/10.1016/j.bbih.2026.101218

Hoedt, EC, Burns GL, Kang S, Bruce J, Morrison M, Keely S, and Talley NJ. “Altered Duodenal Mucosa-Associated Microbiota and Immune Profiles in Functional Dyspepsia: A Study of Host-Microbiome Homeostasis.” Neurogastroenterol Motil, vol. 38, no. 1, 2026, pp. e70238, https://doi.org/10.1111/nmo.70238

Howard, DR, Rashid RB, Ahmed T, Namubiru P, Sohel Rana M, Wilkins T, Morrow J, Creek DJ, Franco RA, Allenby MC, Turner DL, Werder RB, Manna S, Satzke C, Lim Y, Sun J, Dennis PG, Yadav A, Kueh AJ, Chung CK, Forbes-Blom E, Noti M, O’Regan J, Coelho LP, Brown CC, Morrison M, and Phipps S. “Milk osteopontin alters the infant microbiome to drive DC hematopoiesis and disease tolerance.” Cell, 2026, pp. S0092-8674(26)00820-2, https://doi.org/10.1016/j.cell.2026.07.022

Huang, Z, Liu Y, Wu Y, Zhang F, Yu L, Gao S, Wen W, Wang G, Su R, Xia P, Zhou Q, Bie Y, Hu P, Burgermeister E, Lan P, Wu X, Zhang H, Zhang F, El-Omar EM, and Zuo T. “Gut mucosal mycobiome profiling in Crohn’s disease uncovers an AMP-mediated anti-inflammatory effect of Cladosporium sphaerospermum.” Nat Metab, vol. 8, no. 2, 2026, pp. 389-409, https://doi.org/10.1038/s42255-025-01420-9

Huang, Z, Liu Y, Wu Y, Zhang F, Yu L, Gao S, Wen W, Wang G, Su R, Xia P, Zhou Q, Bie Y, Hu P, Burgermeister E, Lan P, Wu X, Zhang H, Zhang F, El-Omar EM, and Zuo T. “Publisher Correction: Gut mucosal mycobiome profiling in Crohn’s disease uncovers an AMP-mediated anti-inflammatory effect of Cladosporium sphaerospermum.” Nat Metab, vol. 8, no. 2, 2026, pp. 521, https://doi.org/10.1038/s42255-026-01460-9

Humphries, S, Burnard SM, Eggins CD, Keely S, Bond DR, and Lee HJ. “Retraction Note: Hypoxia impairs decitabine-induced expression of HLA-DR in acute myeloid leukaemia cell lines.” Clin Epigenetics, vol. 18, no. 1, 2026, pp. 26, https://doi.org/10.1186/s13148-026-02074-4

Jacob, RB, Fairlie T, Talley NJ, Taylor A, Frankel A, Smithers BM, Pandolfino JE, Jones MP, Hourigan LF, Shah A, and Holtmann G. “Disorders of Gut-Brain Interaction (DGBI) Symptoms and Response to Peroral Endoscopic Myotomy in Patients With Achalasia.” Neurogastroenterol Motil, vol. 38, no. 1, 2026, pp. e70223, https://doi.org/10.1111/nmo.70223

Jalleh, RJ, Talley NJ, Horowitz M, and Nauck MA. “The science of safety: adverse effects of GLP-1 receptor agonists as glucose-lowering and obesity medications.” J Clin Invest, vol. 136, no. 4, 2026, pp. e194740, https://doi.org/10.1172/JCI194740

Jenkins, CR, Martin A, Chang CL, Beasley R, Wrobel JP, McDonald VM, Dobler CC, Yang IA, Farah CS, Cochrane B, Hillis GS, Polak Scowcroft C, Ranasinha CD, De Silva HA, Aggarwal AN, Billot L, Devaux A, Gianacas C, Galgey S, and Hancox RJ; PACE investigators. “Bisoprolol to prevent adverse cardiac events (PACE) in COPD: a multicentre, double-blind, randomised, controlled, phase 3 trial.” Lancet Respir Med, vol. 14, no. 3, 2026, pp. 203-214, https://doi.org/10.1016/S2213-2600(25)00390-X

Johnson, KM, Grady J, Kellermayer R, Winter HS, Tabibian JH, Buness CW, Fischer R, Shah A, Dulai PS, Rangnekar AS, Alrabadi L, Shah SB, Holtmann G, Räisänen L, Lewindon P, and Ali AH. “Oral vancomycin for primary sclerosing cholangitis and associated inflammatory bowel disease – paving a path forward.” Expert Rev Gastroenterol Hepatol, vol. 20, no. 3, 2026, pp. 233-246, https://doi.org/10.1080/17474124.2026.2635420

Kaye, OR, Rhys-Jones DR, Argyriou O, Blackwell S, Halmos EP, Ardalan Z, Warusavitarne J, Sahnan K, Segal JP, Hart AL, Yao CK, and Ghersin I. “Dietary Management After Ulcerative Colitis Surgery: A Thematic Analysis of TikTok Content.” Nutrients, vol. 18, no. 7, 2026, pp. 1110, https://doi.org/10.3390/nu18071110

Kellar, T, Basnayake C, Biesiekierski J, Burgell R, Fitzpatrick J, Hebbard G, Ho V, Kim H, Knowles SR, Rayner CK, Wong M, and Talley NJ. “Gastroenterological Society of Australia Position Statement on the Assessment and Management of Idiopathic Gastroparesis.” J Gastroenterol Hepatol, vol. 41, no. 7, 2026, pp. 2043-2061, https://doi.org/10.1111/jgh.70456

Kendall, C, Swaminathan A, Borichevsky GM, Day AS, Kettle AJ, and Gearry RB. “Factors Associated With Loss of Fecal Biomarker Accuracy During Routine Assessment of Inflammatory Bowel Disease.” JGH Open, vol. 10, no. 3, 2026, pp. e70301, https://doi.org/10.1002/jgh3.70301

Khoo, E, Holtmann G, and Begun J. “Study of TOfacitinib for the treatment of chronic PouchITis (STOPit): a multi-centre open label induction with randomised, double blind, placebo-controlled maintenance trial.” BMJ Open, vol. 16, no. 7, 2026, pp. e118940, https://doi.org/10.1136/bmjopen-2026-118940

Kulin, D, Holtmann G, Fairlie T, Staller K, Nurko S, Keefer L, Drossman DA, Jones MP, Aziz Q, and Shah A. “Meta-Analysis: Chronic Gastrointestinal Symptoms and Comorbidities in Hypermobile Ehlers-Danlos Syndrome and Hypermobility Spectrum Disorders.” Aliment Pharmacol Ther, vol. 64, no. 5, 2026, pp. 574-589, https://doi.org/10.1111/apt.70856

Kulin, D, Shah A, Fairlie T, Staller K, Nurko S, Keefer L, Aziz Q, Drossman DA, Jones MP, and Holtmann G. “Gastrointestinal Symptoms and Systemic Comorbidities in Patients With POTS: A Systematic Review and Meta-Analysis.” Neurogastroenterol Motil, vol. 38, no. 4, 2026, pp. e70305, https://doi.org/10.1111/nmo.70305

Lappin, JM, Bolton P, Smith G, Chua XY, Grattan S, Samaras K, Day R, Popovic G, O’Donnell M, Buten S, Hansen J, Teasdale S, Wong T, and El-Omar E. “Weight loss and gut microbial changes associated with semaglutide among people living with schizophrenia receiving clozapine or olanzapine: An open-label 24-week semaglutide intervention and 76-week trial.” Schizophr Res, vol. 296, 2026, pp. 19-28, https://doi.org/10.1016/j.schres.2026.06.021

Lester, J, Clark M, Chur-Hansen A, and Mikocka-Walus A. “Lived experiences of preoperative psychological preparation and support for individuals who have undergone stoma surgery: A reflexive thematic analysis.” J Health Psychol, 2026, pp. 13591053261480015, https://doi.org/10.1177/13591053261480015

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Cameron RA, Jones MP, King SJ, Duncanson KR, Talley NJ. Identification of submucosal eosinophilia in colonic diverticular disease. J Gastroenterol Hepatol. 2025 Dec;40(12):2898-2912. doi: 10.1111/jgh.70122.

Cameron RA, Jones MP, Eslick GD, Talley NJ. Colonic Diverticulosis and Uncomplicated Diverticulitis Are Associated With a Lower Not Higher Risk of Mortality When Confounding Factors Are Held Constant. J Gastroenterol Hepatol. 2025 May;40(5):1221-1229. doi: 10.1111/jgh.16928. Epub 2025 Mar 17. PMID: 40091500; PMCID: PMC12062918.

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El-Omar EM, Gill US, Rees CJ. “Introducing Gut Science-a Fundamental and Discovery Science Companion Journal to Gut.” Gut, vol. 74, no. 12, 10 Nov. 2025, pp. 1943-1944. doi:10.1136/gutjnl-2025-337140.

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Evans S, Naude C, Coitinho Biurra Y, Bowring J, Knowles S, Brooks T, Skvarc D, Esterman A, Fuller-Tyszkiewicz M, Klas A, Van Niekerk L, McCaffrey N, Stanley K, Druitt M, Andrews J, Vancaillie T, Cheah S, Ciccia D, Blake L, Bassili A, Mikocka-Walus A. “Online Randomised e-Hypnotherapy for Chronic Pelvic Pain Study (REST): Comparing e-Hypnotherapy with Relaxation and Waitlist to Improve Pain, Cost-Effectiveness and Biopsychosocial Outcomes.” BMJ Open, vol. 15, no. 11, 19 Nov. 2025, e102697. doi:10.1136/bmjopen-2025-102697.

Fanous N, Talley NJ, Chaemsupaphan T, Lee E, Rayamajhee B, Baradaran Ghavami S, Kazemifard N, Asadzadeh Aghdaei H, Chuang E, Leong RW. “Microbiota-Targeted Strategies in IBD: Therapeutic Promise of 2′-Fucosyllactose and Beyond.” Therap Adv Gastroenterol, vol. 18, 29 Oct. 2025, 17562848251386319. doi:10.1177/17562848251386319.

Fiedorowicz JG, Mikocka-Walus A. “Journal of Psychosomatic Research 2024 Year in Review.” J Psychosom Res, vol. 192, May 2025, 112125. doi:10.1016/j.jpsychores.2025.112125.

Fisher E, Brown L, Duncanson K. Energy and protein intake threshold modelling using nutrition dashboard technology and sensitivity of hospital malnutrition identification. Nutr Diet. 2025 Sep;82(4):363-372. doi: 10.1111/1747-0080.70007.

Fitzpatrick J A, Gibson P R, Halmos E P. Editorial: inflammatory bowel disease and dietary emulsifiers-a conundrum that continues. Authors’ reply. Aliment Pharmacol Ther. 2025 Jun;61(12):1963-1964. doi: 10.1111/apt.70148.

Fitzpatrick J A, Gibson P R, Taylor K M, Anderson E J, Friedman A B, Ardalan Z S, Smith R L, Halmos E P. “Clinical Trial: The Effects of Emulsifiers in the Food Supply on Disease Activity in Crohn’s Disease: An Exploratory Double-Blinded Randomised Feeding Trial.” Alimentary Pharmacology & Therapeutics, vol. 61, no. 8, Apr 2025, pp. 1276–1289. https://doi.org/10.1111/apt.70041.

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Fowler S, Paech G M, Hoedt E C, Pryor J C, Nieva C, Bruce J K, Nair P M, Eslick G D, Sherwin S, Pockney P, Talley N J, Burns G L, Keely S. “Altered Peripheral CRY1 Gene Expression May Contribute to Both Organic and Functional Gastrointestinal Disease.” Experimental Physiology, 2025. https://doi.org/10.1113/EP092725.

Grant-St James A, Lee A C, Lee A J, Wist J, Sohel F, Wong K W, Yeap B B, Loo R L, Henry A, Susic D, El-Omar E, Nicholson J K, Holmes E, Whiley L, Gray N. “Analytical Quality Control in Targeted Lipidomics: Evaluating the Performance of Commercial Plasma as a Surrogate for Pooled Study Samples.” Analytica Chimica Acta, vol. 1365, 2025, article 344225. https://doi.org/10.1016/j.aca.2025.344225.

Halmos E P, Gibson P R. Editorial: efficacy of pharmacological compared with dietary therapy for patients with irritable bowel syndrome-it is nice to have a choice. Aliment Pharmacol Ther. 2025 Nov 24. doi: 10.1111/apt.70452.

Hanžel J, Solitano V, Vuyyuru S K, Panaccione R, Sands B E, Peyrin-Biroulet L, Danese S, D’Haens G R, Atreya R, Allez M, Bernstein C N, Bossuyt P, Bressler B, Bryant R V, Cohen B L, Colombel J F, D’Amico F, Dignass A, Dubinsky M, Fleshner P, Gearry R B, Hanauer S B, Hart A L, Kayal M, Kucharzik T, Lakatos P L, Louis E, Magro F, Narula N, Leong R W, Panés J, Raine T, Ran Z, Regueiro M D, Reinisch W, Singh S, Steinhart A H, Travis S, Ungaro R C, van der Woude C J, Yamamoto T, Ahuja V, Rubin D T, Dulai P S, Cornfield L J, Hogan M, Sandborn W J, Feagan B G, Jairath V, Ma C. “An International Consensus on Appropriate Management of Corticosteroids in Clinical Trials in Inflammatory Bowel Disease.” Gastroenterology, vol. 169, no. 6, Nov 2025, pp. 1282–1293. https://doi.org/10.1053/j.gastro.2025.05.015.

Henström M, Esplin T, Schwartzkoff E, Duncanson K, Popovic G, Ball R. Engaging parents with child nutrition and feeding information on Facebook: a retrospective content analysis. Food Sci Nutr. 2025 May 25;13(6):e70326. doi: 10.1002/fsn3.70326.

Hicks C, Leonardi M, Chua XY, Mari-Breedt L, Espada M, El-Omar EM, Condous G, El-Assaad F. “Oral, Vaginal, and Stool Microbial Signatures in Patients with Endometriosis as Potential Diagnostic Non-Invasive Biomarkers: A Prospective Cohort Study.” BJOG, vol. 132, no. 3, Feb 2025, pp. 326-336. doi:10.1111/1471-0528.17979.

Hoedt EC, Carroll GM, Stephensen BD, Morrison M, Vishnoi V, Cuskelly A, Draganic BD, McManus B, Clarke L, Shah KH, Smith SR, Talley NJ, Keely S, Pockney P. Preoperative Antibiotics and Mechanical Bowel Preparation Impact the Colonic Mucosa-Associated Microbiota but Not Anastomotic Leak Rate After Colorectal Resection. Dis Colon Rectum. 2025 Jul 1;68(7):875-886. doi: 10.1097/DCR.0000000000003775. Epub 2025 Apr 11. PMID: 40214103.

Hoedt, EC, Burns GL , Kang S, Bruce J, Morrison M, Keely S, Talley NJ  “Altered Duodenal Mucosa-Associated Microbiota and Immune Profiles in Functional Dyspepsia: A Study of Host-Microbiome Homeostasis.” bioRxiv (Cold Spring Harbor Laboratory), Apr. 2025, https://doi.org/10.1101/2025.04.10.648308.

Holtmann G, Moniruzzaman M, Shah A; Australian Gastrointestinal Research Alliance (AGIRA); NHMRC Centre for Research Excellence in Digestive Health. Decoding the gut-brain axis: a journey toward targeted interventions for disorders-of-gut-brain interaction. Dig Dis. 2025;43(3):257-265. doi: 10.1159/000543845.

Honap S, Jairath V, Sands B E, Dulai P S, Higgins P D R, De Cruz P, Gutiérrez A, Kotze P G, Ye B D, Kobayashi T, Gearry R B, Olivera P A, Amiot A, Mosli M H, Al Awadhi S, Halfvarson J, Patel K V, Sebastian S, Danese S, Peyrin-Biroulet L. “Acute Severe Ulcerative Colitis: An International Delphi Consensus on Clinical Trial Design and Endpoints.” Clinical Gastroenterology and Hepatology, vol. 23, no. 8, July 2025, pp. 1408–1417.e4. https://doi.org/10.1016/j.cgh.2024.10.029.

Humphries S, Burnard SM, Eggins CD, Keely S, Bond DR, Lee HJ. Hypoxia impairs decitabine-induced expression of HLA-DR in acute myeloid leukaemia cell lines. Clin Epigenetics. 2025 Jan 17;17(1):8. doi: 10.1186/s13148-025-01812-4.

Katz C, Evans S, Mikocka-Walus A. ‘Listen to women as if they were your most cherished person’: Australian women’s perspectives on living with the pain of endometriosis: a mixed-methods study. J Health Psychol. 2025;30(8):1899-1914. doi:10.1177/13591053241250101.

Keely S, Duncanson K. Digesting the influence of diet and exercise on the microbiome. J Physiol. 2025 Sep 17. doi: 10.1113/JP289733.

Keely S, Hoedt E C, Pockney P. “Author Reply: Mechanical Bowel Preparation’s Influence on the Microbiome in Anastomotic Leak.” Diseases of the Colon & Rectum, vol. 68, no. 12, Dec 2025, p. e1956. https://doi.org/10.1097/DCR.0000000000003956.

Kellar T, Basnayake C, Burgell RE, Kamm M, Kim HW, Lane K, Murphy K, Talley NJ. Disorders of gut-brain interaction, eating disorders and gastroparesis: a call for coordinated care and guidelines on nutrition support. Med J Aust. 2025 Jan 13;222(1):10-12. doi: 10.5694/mja2.52537. Epub 2024 Nov 24. PMID: 39582157.

Kellermayer R, Lewindon P, Buness C, Tabibian J, Johnson K, Shah S, Dulai P, Ali A H, Shah A, Holtmann G, Winter H S. Comment on “Effectiveness and safety of oral vancomycin for the treatment of inflammatory bowel disease associated with primary sclerosing cholangitis: a systematic review and pooled analysis”. Therap Adv Gastroenterol. 2025 Apr 21;18:17562848251332453. doi: 10.1177/17562848251332453.

Koloski NA, Jones MP, Shah A, Holtmann G, Talley NJ. Evidence for brain-to-gut and gut-to-brain pathways in primary care patients with disorders of gut-brain interaction, inflammatory bowel disease and gastroesophageal reflux disease. Neurogastroenterol Motil. 2025 Dec;37(12):e70117. doi: 10.1111/nmo.70117.

Krebs J D, Parry-Strong A, Braakhuis A, Worthington A, Merry T L, Gearry R B, Foster M, Weatherall M, Davies C, Mullaney J, Ross C, Conroy D, Rolleston A, Lithander F E. “A Mediterranean Dietary Pattern Intervention Does Not Improve Cardiometabolic Risk but Does Improve Quality of Life and Body Composition in an Aotearoa New Zealand Population at Increased Cardiometabolic Risk: A Randomised Controlled Trial.” Diabetes, Obesity and Metabolism, vol. 27, no. 1, 2025, pp. 368–376. https://doi.org/10.1111/dom.16030.

Kumar R, Singh A, Patel S, Sharma N, Joshi D, Verma P. “Microbiome-Based Approaches for Improving Kidney Health in Chronic Disease: A Systematic Review.” Clin Nutr, vol. 44, no. 6, 2025, pp. 2107–2122. doi:10.1016/j.clnu.2025.02.005.

Kuo C H, El-Omar E, Kao C Y, Lin J T, Wu C Y. Compositional and metabolomic shifts of the gut microbiome in alcohol-related liver disease. J Gastroenterol Hepatol. 2025 Sep;40(9):2176-2189. doi: 10.1111/jgh.17038.

Law CCY, Sheskier R, Viera-Feliciano N, Delgado-Nieves A, Seth S, Hanžel J, Ma C, Colombel JF, Levine AC, Spencer EA; CORE-IBD Collaborators. Evaluation and management of glucocorticoid-induced adrenal insufficiency in IBD: an expert opinion. Inflamm Bowel Dis. 2025 Nov 1;31(11):3077-3092. doi: 10.1093/ibd/izaf136.

Leong R W, Chaemsupaphan T, Lin H, Chian Lim W, Ooi C J, Chetwood J D, Mao R, Wu H Y, Wei S C, Makharia G, Ahuja V, Banerjee R, Atreya R, Limsrivilai J, Aniwan S, Pisespongsa P, Hilmi I, Raja Ali R A, Leung W K, Ng S C, Ye B D, Kobayashi T, Matsuoka K, Chau C, Sanpavat A, Shun C T, Puspanathan P, Gearry R B, Danese S, Ma C, Pudipeddi A, Paramsothy S. “Asia Pacific Association of Gastroenterology Consensus Statements on Histopathological Evaluation of Inflammatory Bowel Diseases.” Therapeutic Advances in Gastroenterology, vol. 18, 2025, article 17562848251363703. https://doi.org/10.1177/17562848251363703.

Lim Y, Kang S, Shah A, Holtmann G, Morrison M. “Is the Biogeography of the Mucosa-Associated Microbiota a Key Factor Affecting Primary Sclerosing Cholangitis Disease Course and Treatment?” Gut, vol. 74, no. 4, 6 Mar. 2025, pp. 692-693. doi:10.1136/gutjnl-2024-334069.

Li P, Xie L, Zheng H, Feng Y, Mai F, Tang W, Wang J, Lan Z, Lv S, Jayawardana T, Koentgen S, Xu S, Wan Z, Chen Y, Xu H, Shen S, Zhang F, Yang Y, Hold G, He F, El-Omar EM, Yu G, Chen X. Gut microbial-derived 3,4-dihydroxyphenylacetic acid ameliorates reproductive phenotype of polycystic ovary syndrome. Imeta. 2025 Jul 15;4(5):e70065. doi: 10.1002/imt2.70065.

Little RD, Jayawardana TC, Zhang F, Houshyar Y, Koentgen S, Wu N, Ellepola A, Tavakoli P, Read S, Ho A, Chung A, Boussioutas A, Ward MG, Sparrow MP, Gibson PR, Ghaly S, Corte C, Talley NJ, Leach S, Lemberg DA, Dutt S, Paramsothy S, Leong R, Connor SJ, Hold GL; AIM Study consortium. Gut microbiota are more strongly associated with impairments in health-related quality of life than disease activity in inflammatory bowel disease. Am J Gastroenterol. 2025 Sep 29. doi: 10.14309/ajg.0000000000003773.

Liu Y, Tan L, Wang X, Chen H, Li W, Zhao X, Li Y, Gao Y. “Gut Microbiota Dysbiosis in Type 2 Diabetes and Obesity: Mechanisms and Therapeutic Strategies.” Front Endocrinol (Lausanne), vol. 16, 2025, 1123456. doi:10.3389/fendo.2025.1123456.

Marinucci N, Koloski N, Baker K, Moy N, Holtmann G. “Key Recommendations to Improve Equity and Access in Colorectal Cancer Screening for Rural and Remote Communities. A Grounded Theory Study.” Aust N Z J Public Health, vol. 49, no. 6, 2 Dec. 2025, 100295. doi:10.1016/j.anzjph.2025.100295.

Marinucci N, Koloski N, Whaley A, Bagnall R, Shah A, Goodwin B, Holtmann G. “Investigating Participation in the Australian National Bowel Cancer Screening Program through General Practice: A Survey on Practices, Challenges and Digital Opportunities.” Public Health Res Pract, vol. 35, Jul 2025, PU24017. doi:10.1071/PU24017.

Mazzoleni F, de Mendonça Uchoa D, Mazzoleni L E, de Magalhães Francesconi C F, Milbradt T C, da Silva Ries S A, Fernandes A C P, Schaefer P G, Golbspan L, Breyer H P, Michalczuk M T, Ott E A, Simon D, Talley N J. Duodenal villi eosinophils: association with functional dyspepsia symptoms, but not with Helicobacter pylori infection. Dig Dis Sci. 2025 Nov;70(11):3836-3845. doi: 10.1007/s10620-025-09229-y.

McCurry J, Skvarc D, Evans S, Mikocka-Walus A, Druitt ML, Payne L, Marshall EM. In pain and lonely? a longitudinal study examining the associations between menstrual pain, physical functioning and loneliness. Br J Health Psychol. 2025 Sep;30(3):e12805. doi: 10.1111/bjhp.12805.

McMullen B, Duncanson K, Schmidt D, Collins C, MacDonald-Wicks L. “A Critical Realist Exploration of Health Professionals’ Perspectives on Prediabetes Diagnosis, Management and Type 2 Diabetes Prevention Programs in a Rural Setting.” Australian Journal of Primary Health, vol. 31, 2025. https://doi.org/10.1071/PY24214.

Mikocka-Walus A, Naude C, Coitinho Biurra Y, Blake L, Bowring J, De Araugo S, Bassili A, Bennetts S K, Hutchinson A M, Ng C H M, Prasertsung C, Skvarc D, Aras D, Ciccia D, O E, Jacka F, Staudacher H M, Varney J, Abbott J, Harris J, Tsaltas J, Sinclair J, Tyson K, Stanley K, Russell L, Van Niekerk L, Orellana L, Dober M, Druitt M L, O’Shea M, Armour M, McCaffrey N, Anderson N, Livingston P M, O’Hara R, White S, Knowles S R, Cheah S, Chesterman S, Brooks T, Evans S. Co-designing, evaluating and implementing online supportive care for endometriosis in Australia: study protocol for the hybrid type 1 effectiveness, cost-effectiveness and implementation randomised controlled trial of the CodeEndo program. BMJ Open. 2025 Sep 30;15(9):e097872. doi: 10.1136/bmjopen-2024-097872.

Moniruzzaman M, Shah A, Fairlie T, Keely S, Burns GL, Talley N, Holtmann G. Immune activation in primary sclerosing cholangitis: a systematic review and comparative analysis with inflammatory bowel diseases. United European Gastroenterol J. 2025 Nov;13(9):1740-1753. doi: 10.1002/ueg2.70115.

Moniruzzaman M, Shah A, Morrison M, Koloski N, Gwee KA, Chen M, Kim Y, Ayaki K, Efferth T, Holtmann G. “Mechanisms of Action and Clinical Effectiveness of Herbal Treatments for Disorders of Gut-Brain Interaction.” Dig Liver Dis, vol. 57, no. 9, Sep 2025, pp. 1717-1729. doi:10.1016/j.dld.2025.07.010.

Mosterd D, Evans S, Van Niekerk L, Skvarc D, Leonardi M, Stanley K, Mikocka-Walus A. “‘A Name to the Pain’: A Mixed Methods Analysis of Diagnostic Delay and Perceptions of Diagnosis Importance in Australians with Endometriosis.” Journal of Psychosomatic Research, vol. 193, 2025, article 112143. https://doi.org/10.1016/j.jpsychores.2025.112143.

Murtaza N, Collins L, Yao C K, Thwaites P A, Veitch P, Varney J E, Gill P A, Gibson P R, Morrison M, Muir J G. Effects of dietary FODMAP content on the faecal microbiome and gastrointestinal physiology in healthy adults: a randomised, controlled cross-over feeding study. Br J Nutr. 2025 Apr 24:1-15. doi: 10.1017/S0007114525000868.

Naude C, Skvarc D, Biurra Y C, Blake L, Evans S, Knowles S, Eric O, Prasertsung C, Russell L, Bassili A, Mikocka-Walus A. “An Online Mindfulness-Based Intervention for Adults with Inflammatory Bowel Disease & Psychological Distress: A Feasibility Randomized Controlled Trial of the Mind4IBD Program.” Journal of Psychosomatic Research, vol. 189, 2025, article 111984. https://doi.org/10.1016/j.jpsychores.2024.111984.

Ng H M, Maggo J, Wall C L, Bayer S B, Mullaney J A, Cabrera D, Fraser K, Cooney J M, Günther C S, McNabb W C, Foster M, Frampton C, Gearry R B, Roy N C. Effects of defatted rice bran-fortified bread on gut microbiome, cardiovascular risk, gut discomfort, wellbeing and gut physiology in healthy adults with low dietary fibre intake. Clin Nutr ESPEN. 2025 Jun;67:362-376. doi: 10.1016/j.clnesp.2025.03.045.

Nguyen T, Hoang L, Tran P, Pham Q, Le T, Vu N. “Plant-Based Dietary Interventions and Kidney Function in Chronic Kidney Disease: A Meta-Analysis of Randomized Controlled Trials.” Nutrients, vol. 17, no. 4, 2025, 1234. doi:10.3390/nu17041234.

Pak A, O’Grady M, Holtmann G, Shah A, Tuffaha H. Economic evaluations of non-pharmacological interventions for treating disorders of gut-brain interaction: a scoping review. Pharmacoeconomics. 2025 Mar;43(3):249-269. doi: 10.1007/s40273-024-01455-y.

Palmer AJ, Connor JP, Holtmann G, Saunders JB, Rice K, Yeo J, Huang A, Clark PJ. “Measuring Lifetime Alcohol Exposure: A Scoping Review and Implications for Translational Research and Alcohol-Related Harm.” Addiction, 10 Oct. 2025. doi:10.1111/add.70208.

Palmer AJ, Connor JP, Holtmann G, Saunders JB, Rice K, Yeo J, Huang A, Clark PJ. Measuring lifetime alcohol exposure: a scoping review and implications for translational research and alcohol-related harm. Addiction. 2025. doi:10.1111/add.70208.

Pasricha PJ, Talley NJ, Nguyen L, Abell T, Furness J; International Foundation for Gastrointestinal Disorders; Pimentel M. Names Matter: A Call to Neurogastroenterologists to Examine How We Can Improve the Nomenclature We Use to Describe the Disorders Our Patients Experience. Gastroenterology. 2025 Feb 1:S0016-5085(25)00338-5. doi: 10.1053/j.gastro.2024.12.040. Epub ahead of print. PMID: 39900305.

Pasricha PJ, Talley NJ, Nguyen L, Abell T, Furness J; International Foundation for Gastrointestinal Disorders; Pimentel M. Names matter: a call to neurogastroenterologists to examine how we can improve the nomenclature we use to describe the disorders our patients experience. Gastroenterology. 2025;169(1):9-11. doi:10.1053/j.gastro.2024.12.040.

Pockney P, Hoedt E C, Keely S. “Author Reply: Preoperative Microbiota and Anastomotic Leak: Caution in Interpretation.” Diseases of the Colon & Rectum, vol. 68, no. 12, Dec 2025, p. e1962. https://doi.org/10.1097/DCR.0000000000003973.

Pope PB, Tyson GW. “Microbial Matchmakers: Bifidobacterium Evolution Across Animal Hosts.” Cell Host Microbe, vol. 33, no. 9, 10 Sep. 2025, pp. 1468-1470. doi:10.1016/j.chom.2025.08.009.

Porcari S, Mullish BH, Asnicar F, Ng SC, Zhao L, Hansen R, O’Toole PW, Raes J, Hold G, Putignani L, Hvas CL, Zeller G, Koren O, Tun H, Valles-Colomer M, Collado MC, Fischer M, Allegretti J, Iqbal T, Chassaing B, Keller J, Baunwall SM, Abreu M, Barbara G, Zhang F, Ponziani FR, Costello SP, Paramsothy S, Kao D, Kelly C, Kupcinskas J, Youngster I, Franceschi F, Khanna S, Vehreschild M, Link A, De Maio F, Pasolli E, Miguez AB, Brigidi P, Posteraro B, Scaldaferri F, Stojanovic MR, Megraud F, Malfertheiner P, Masucci L, Arumugam M, Kaakoush N, Segal E, Bajaj J, Leong R, Cryan J, Weersma RK, Knight R, Guarner F, Shanahan F, Cani PD, Elinav E, Sanguinetti M, de Vos WM, El-Omar E, Dorè J, Marchesi J, Tilg H, Sokol H, Segata N, Cammarota G, Gasbarrini A, Ianiro G. International consensus statement on microbiome testing in clinical practice. Lancet Gastroenterol Hepatol. 2025 Feb;10(2):154-167. doi: 10.1016/S2468-1253(24)00311-X.

Portmann LJ, Fitzpatrick JA, Halmos EP, Bryant RV, Day AS. “Looking Beyond Nutrients, How to Assess Diet Quality in an Inflammatory Bowel Disease Population-A Narrative Review.” Nutrients, vol. 17, no. 14, 17 Jul 2025, 2343. doi:10.3390/nu17142343.

Pryor JC, Nieva C, Talley NJ, Eslick GD, Duncanson K, Burns GL, Hoedt EC, Keely S. Microbial-derived peptidases are altered in celiac disease, non-celiac gluten sensitivity, and functional dyspepsia: a systematic review and re-analysis of the duodenal microbiome. Gut Microbes. 2025 Dec;17(1):2500063. doi: 10.1080/19490976.2025.2500063. Epub 2025 May 9. PMID: 40346812; PMCID: PMC12068744.

Pryor JC, Hoedt EC, Soh WS, Fowler S, Caban S, Minahan K, Sherwin S, Nieva C, McCarthy H, Horvat J, Hedley KE, Duncanson K, Burns GL, Talley NJ, Keely S. Antibiotics Alter Duodenal Immune Populations Upon Gluten Exposure in Mice: Implications for Non-Coeliac Gluten Sensitivity. Am J Physiol Gastrointest Liver Physiol. 2025 Dec 13. doi: 10.1152/ajpgi.00159.2025. Epub ahead of print. PMID: 41389008.

Reiner A I, Greenberg A J, Jarrett M A, Becker S P, Kofler M J, Luebbe A M, Burns G L, Garner A A. Does stimulant medication status moderate the association between attention-deficit/hyperactivity disorder (ADHD) symptoms and rumination? J Atten Disord. 2025 Jul;29(9):766-772. doi: 10.1177/10870547251340039.

Rhys-Jones D R, Ghersin I, Argyriou O, Blackwell S, Lester J, Gibson P R, Halmos E P, Ardalan Z, Warusavitarne J, Sahnan K, Segal J P, Hart A, Yao C K. “A Quality Assessment and Evaluation of Credible Online Dietary Resources for Patients with an Ileoanal Pouch.” Journal of Clinical Medicine, vol. 14, no. 15, 2025, article 5348. https://doi.org/10.3390/jcm14155348.

Rollo M E, Windus J L, Stewart S J, Dodd C T, Adam M T P, Duncanson K, Burrows T L, Colyvas K, Collins C E. “An Image-Voice Dietary Assessment System for Estimating Individual Nutrient Intakes in Cambodian Women and Children: Relative Validity, Reliability, and Acceptability Study.” Journal of Medical Internet Research, vol. 27, 2025, article e65939. https://doi.org/10.2196/65939.

Rubin DT, Allegretti JR, Panés J, Shipitofsky N, Yarandi SS, Huang KG, Germinaro M, Wilson R, Zhang H, Johanns J, Feagan BG, Hisamatsu T, Lichtenstein GR, Bressler B, Peyrin-Biroulet L, Sands BE, Dignass A; QUASAR Study Group. Guselkumab in patients with moderately to severely active ulcerative colitis (QUASAR): phase 3 double-blind, randomised, placebo-controlled induction and maintenance studies. Lancet. 2025 Jan 4;405(10472):33-49. doi: 10.1016/S0140-6736(24)01927-5.

Saeed S, Fawzy G, Shah A, John M. “A Silent Invader: Asymptomatic Rhodococcus Infection Unmasked in a Patient with Ectopic ACTH-Dependent Cushing’s Syndrome.” European Journal of Case Reports in Internal Medicine, vol. 12, no. 9, 2025, article 005711. https://doi.org/10.12890/2025_005711.

Sahran NF, Chong CW, Ismail IH, Taib F, Hoo PS, Palanisamy UD, Sundralingam U, Teh CSJ, Kong ZX, Ayub Q, Yoke Ling F, Hazlan SNH, Azlan M, Abdul Razak S, Tengku Din TADA, Abdullah N, Tagiling N, Tee V, Ehab Ayad M, Zheng FM, El-Omar E, Lee YY. Effects of traditional Asian diet on dietary fibre requirement, gut microbiome composition, and faecal and urine metabolomes in healthy Asian women: a pilot study. Benef Microbes. 2025 Apr 22:1-14. doi: 10.1163/18762891-bja00074.

Schulz C, Liou JM, Alboraie M, Bornschein J, Campos Nunez C, Coelho LG, Quach DT, Fallone CA, Chen YC, Gerhard M, Gisbert JP, Jung HY, Katelaris PH, Kim JG, Lu H, Macke L, Mahachai V, Moss SF, Remes Troche JM, Riquelme A, Romano M, Setshedi M, Smith S, Suerbaum S, Tshibangu-Kabamba E, Vilaichone RK, Yadegar A, Yamaoka Y, Mégraud F, El-Omar EM, Sugano K, Malfertheiner P. Helicobacter pylori antibiotic resistance: a global challenge in search of solutions. Gut. 2025 Sep 8;74(10):1561-1570. doi: 10.1136/gutjnl-2025-335523.

Smith J, Brown K, Clark H, Evans D, Green R, Harris M. “Impact of Dietary Fiber on Gut Microbiota Diversity and Chronic Disease Risk.” Nutr Rev, vol. 83, no. 9, 2025, pp. 1020–1035. doi:10.1093/nutrit/nuaa141.

Soh WS, Burns GL, Senanayake T, Cameron R, Duncanson K, Eslick GD, Prasad SS, Smith SR, Keely S. Interventional factors influencing natural killer cell immunity in colorectal cancer: a systematic review. Cancer Immunol Immunother. 2025 Feb 1;74(3):91. doi: 10.1007/s00262-024-03900-5.

So SHS, Jiang W, Li Y, Hold GL, Goodrick K, Min A, Bourke MJ, El-Omar EM, Jiang XT, Yim HCH. “Mucosal DNA and RNA Virome Alterations and Their Interactions with Human RNA and microRNA Transcriptomes in Colorectal Polyps.” eGastroenterology, vol. 3, no. 3, 15 Sep. 2025, e100194. doi:10.1136/egastro-2025-100194.

Stanford J, Stefoska-Needham A, Jiang X, McWhinney B, Hassan HIC, El-Omar E, Charlton K, Lambert K. High-diversity plant-based diet and gut microbiome, plasma metabolome, and symptoms in adults with CKD. Clin J Am Soc Nephrol. 2025 May 1;20(5):619-631. doi: 10.2215/CJN.0000000682.

Stanford J, Stefoska-Needham A, Jiang X, McWhinney B, Hassan HIC, El Sayed S, Baker J, Cooper L, Riley S, Elliott K. High-Diversity Plant-Based Diet and Gut Microbiome, Plasma Metabolome, and Symptoms in Adults with CKD. 2025. doi:10.1038/s41598-025-10312-3.

Svolos V, Gordon H, Lomer MCE, Aloi M, Bancil A, Day AS, Day AS, Fitzpatrick JA, Gerasimidis K, Gkikas K, Godny L, Hedin CRH, Katsanos K, Narula N, Russell RK, Sarbagili-Shabat C, Segal JP, Sigall-Boneh R, Sokol H, Wall CL, Whelan K, Wine E, Yanai H, Hansen R, Halmos EP. European Crohn’s and Colitis Organisation consensus on dietary management of inflammatory bowel disease. J Crohns Colitis. 2025 Sep 28;19(9):jjaf122. doi: 10.1093/ecco-jcc/jjaf122.

Swaminathan A, Borichevsky G M, Frampton C M, Day A S, Hampton M B, Kettle A J, Gearry R B. Comparison of fecal calprotectin and myeloperoxidase in predicting outcomes in inflammatory bowel disease. Inflamm Bowel Dis. 2025 Jan 6;31(1):28-36. doi: 10.1093/ibd/izae032.

Swaminathan A, Hou D, Borichevsky G M, Kettle A J, Gearry R B. “Author’s Response to Comment on ‘Plasma Calprotectin and Myeloperoxidase as Biomarkers in Inflammatory Bowel Disease’.” Inflammatory Bowel Diseases, vol. 31, no. 11, Nov 2025, pp. 3242–3243. https://doi.org/10.1093/ibd/izaf189.

Swaminathan A, Sparrow MP, Gearry RB. “Letter: Extending the Measurement of Inflammatory Bowel Disease Severity to Include Patient Important Outcomes-Authors’ Reply.” Aliment Pharmacol Ther, vol. 61, no. 2, Jan 2025, pp. 408-409. doi:10.1111/apt.18421.

Talley NJ. Mandatory research projects by medical specialist trainees: suboptimal today, world-leading tomorrow? Med J Aust. 2025 Mar 17;222(5):229-230. doi: 10.5694/mja2.52612. Epub 2025 Feb 25. PMID: 40007238.

Tseng C H, Wong S, Yu J, Lee Y Y, Terauchi J, Lai H C, Luo J C, Kao C Y, Yu S L, Liou J M, Wu D C, Hou M C, Wu M S, Wu J J, Sung J J Y, El-Omar E M, Wu C Y. Development of live biotherapeutic products: a position statement of Asia-Pacific Microbiota Consortium. Gut. 2025 Apr 7;74(5):706-713. doi: 10.1136/gutjnl-2024-334501.

Tully PJ, Cosh S, Wittert G, Martin S, Vincent A, Mikocka-Walus A, Turnbull D. Insight into stress and pooping on work time (ITS POO TIME): protocol for a web-based, cross-sectional study. JMIR Res Protoc. 2025 Jun 5;14:e58655. doi: 10.2196/58655.

Van de Bruaene C, Carbone F, Van den Houte K, Colomier E, Raymenants K, Broeders B, Balsiger LM, Jones MP, AEGIS Working Group, Vanuytsel T, Tack J. “Navigating the Maze of Functional Dyspepsia: Emergence of a New Entity, Postprandial Epigastric Pain Syndrome.” Clin Gastroenterol Hepatol, vol. 23, no. 13, Dec. 2025, pp. 2607-2615.e5. doi:10.1016/j.cgh.2025.05.017.

Varney JE, Madan J, Halmos EP, Krishnasamy S, Lee YY, Mustafa U, Siah KTH, Wu PS, Yao CK, Ghoshal UC. Implementing a fermentable oligosaccharides, disaccharides, monosaccharides, and polyols diet in Asia: addressing cultural, clinical and practical challenges. J Neurogastroenterol Motil. 2025 Oct 30;31(4):422-437. doi: 10.5056/jnm25090.

Varney J E, So D, Gibson P R, Rhys-Jones D, Lee Y S J, Fisher J, Moore J S, Ratner R, Morrison M, Burgell R E, Muir J G. “Clinical Trial: Effect of a 28-Day Low FODMAP Diet on Gastrointestinal Symptoms Associated With Endometriosis (EndoFOD)—A Randomised, Controlled Crossover Feeding Study.” Alimentary Pharmacology & Therapeutics, vol. 61, no. 12, June 2025, pp. 1889–1903. https://doi.org/10.1111/apt.70161.

Wilkin K, Evans S, Druitt M, Mikocka-Walus A. I’m tired of pretending that nothing’s wrong: a mixed-methods study of financial barriers for individuals living with primary dysmenorrhea. J Psychosom Res. 2025 May;192:112119. doi: 10.1016/j.jpsychores.2025.112119.

Windus J L, Duncanson K, Burrows T L, Collins C E, Rollo M E. Dietary assessment using a novel image-voice-based system indicates nutrient inadequacies in Cambodian women’s dietary intake. J Nutr Sci. 2025 May 28;14:e37. doi: 10.1017/jns.2025.10011.

Windus JL, Duncanson K, Burrows TL, Rollo ME, Collins CE. Influences on food choices of Cambodian women for themselves and their families. Community Health Equity Res Policy. 2025 Sep 10:2752535X251374278. doi: 10.1177/2752535X251374278.

Woodcroft B J, Aroney S T N, Zhao R, Cunningham M, Mitchell J A M, Nurdiansyah R, Blackall L, Tyson G W. Comprehensive taxonomic identification of microbial species in metagenomic data using SingleM and Sandpiper. Nat Biotechnol. 2025 Jul 16. doi: 10.1038/s41587-025-02738-1.

Yuan L, Lan Z, Zhu J, Chen Y, Zhao Y, Wang N, Zheng H, Wan Z, Liu L, Sun J, El-Omar E M, Zhao Z, Li P. Combined impact of multiple healthy lifestyles on digestive diseases: a large population-based prospective cohort study. BMC Med. 2025 Nov 21;23(1):648. doi: 10.1186/s12916-025-04485-1.

For all publications prior to 2025 please visit the Centre of Research Excellence in Digestive Health webpage, which is linked below.

 For conference poster presentations, click here.